November 7
Visualization
I have updated and cleaned up Ler_maxd_viz() so that it shows violin plots for the simulations. In addition, the new simulations have a single MC replicate that has 10 replicate populations (mirroring the greenhouse); the mean and variance of spread is calculated among those 10 populations; and these stats collected across all of the MC replicates. Thus, we account for finite sample size (10 populations) in the empirical mean and variance.
Blogdown
It appears that, on my laptop at least, “Build website” doesn’t actually process new Rmd files. Thus, I need to knit the individual post by hand.